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Jeffrey F. Diberto

4 papers in the library · 250 citations · publishing 2021-2025

Papers

AlphaFold2 structures guide prospective ligand discovery

Science May 16, 2024 Jiankun Lyu, Nicholas J. Kapolka, Ryan H. Gumpper et al. 145 citations

Docking large libraries of molecules against unrefined AlphaFold2 (AF2) models of the σ2 and serotonin 2A (5-HT2A) receptors produced hit rates and affinities as high as those obtained by docking against experimental structures. These results were achieved despite differences in orthosteric residue conformations between the AF2 models and the experimental structures. A cryo–electron microscopy structure of one potent 5-HT2A ligand identified from AF2 docking showed residue accommodations similar to the AF2 prediction. AF2 models may sample low-energy conformations that differ from experimental structures but remain useful for ligand discovery, extending the reach of structure-based drug design.

Molecular insights into psychedelic drug action

Journal of Neurochemistry November 19, 2021 Samuel T. Slocum, Jeffrey F. Diberto, Bryan L. Roth 59 citations

Psychedelic drugs like LSD, mescaline, and psilocybin are gaining renewed scientific and clinical interest due to the need for new mental health treatments, progress in research, and changing drug policies. The FDA's designation of psilocybin as a "Breakthrough Therapy" for treatment-resistant depression has opened a path for these drugs to be used in clinical settings. However, a clearer understanding of how these drugs work at the molecular level is essential for developing such applications. This review examines current knowledge about the molecular details of psychedelic drug actions and suggests that these discoveries can provide new insights into their hallucinogenic and therapeutic mechanisms.

The structural diversity of psychedelic drug actions revealed.

Nat Commun March 19, 2025 Ryan H. Gumpper, Manish K. Jain, Kuglae Kim et al. 31 citations

Classical psychedelics are being studied for treating depression, addiction, anxiety, and cluster headaches. Their therapeutic effects are thought to involve the 5-HT2A serotonin receptor. Seven cryo-EM structures were determined, covering major classes of psychedelic and non-psychedelic agonists, including a β-arrestin-biased compound. These structures reveal both common and distinct molecular interactions between different psychedelics and the receptor. The findings provide a mechanistic understanding of 5-HT2A activation that could aid development of new drugs with fewer side effects.

A suite of engineered mice for interrogating psychedelic drug actions

bioRxiv (Cold Spring Harbor Laboratory) September 26, 2023 Yi-Ting Chiu, Wei Wang, Pierre Llorach et al. 15 citations preprint

Psychedelic drugs such as LSD and psilocybin show promise as treatments for depression, anxiety, PTSD, migraine, and cluster headaches by activating the 5-HT2A receptor (HTR2A). Researchers engineered several new mouse lines to study the role of HTR2A and the neurons that express it. One line allows visualization of the receptor and identification of HTR2A-containing cells, providing a detailed anatomical map. Another line has a humanized version of the receptor, and a third enables targeted genetic manipulation. The mice exhibited expected behavioral responses to psychedelics, confirming their usefulness. Electrophysiology showed that serotonin increases firing of specific pyramidal neurons through HTR2A, consistent with the receptor's location on the cell surface. These tools will help clarify how psychedelics work at molecular, cellular, and behavioral levels.