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Timothy Y. James

University of Michigan–Ann Arbor

4 papers in the library · 24 citations · publishing 2022-2024

Papers

Genome sequencing progenies of magic mushrooms (Psilocybe subaeruginosa) identifies tetrapolar mating and gene duplications in the psilocybin pathway

Fungal Genetics and Biology December 29, 2022 Alistair R. Mctaggart, Timothy Y. James, Jason C. Slot et al. 13 citations

Mating in the psilocybin-producing mushroom Psilocybe subaeruginosa is controlled by a tetrapolar system, with compatibility determined by a homeodomain locus (containing one copy each of HD1 and HD2) and a pheromone/receptor locus (with four homologs of the receptor gene STE3). Two additional pheromone/receptor loci homologous to STE3 do not appear to regulate mating. Alleles in the psilocybin gene cluster were homozygous in the parent and did not vary among five haploid siblings. The species and its relatives carry three copies of PsiH genes, but their effect on psilocybin production is unknown. Genetic improvement requires access to diversity from species' centers of origin, identification of trait genes, and strategies to avoid inbreeding depression.

Domestication through clandestine cultivation constrained genetic diversity in magic mushrooms relative to naturalized populations

Current Biology December 1, 2023 Alistair R. Mctaggart, Stephen Mclaughlin, Jason C. Slot et al. 6 citations

Domestication of the hallucinogenic mushroom Psilocybe cubensis for psilocybin production has led to inbreeding and selfing in commercial cultivars, reducing genetic diversity and heterozygosity. In contrast, a naturalized Australian population, likely introduced from an unknown origin, has recovered from a bottleneck and maintains high genetic diversity. Genome comparisons of 38 Australian isolates and 86 commercial cultivars revealed that cultivars have low effective population sizes, high linkage disequilibrium, and low allelic diversity in mating-compatibility genes, while the Australian population shows higher nucleotide and allelic diversity. The psilocybin gene cluster is nearly identical across most cultivars, but unique alleles in Australia and some cultivars may affect psilocybin biosynthesis.

Wood-loving magic mushrooms from Australia are saprotrophic invaders in the Northern Hemisphere

Fungal Systematics and Evolution July 23, 2024 Alistair R. Mctaggart, K. Scarlettt, Jason C. Slot et al. 5 citations

Magic mushrooms, which produce the compound psilocybin, maintain sexual compatibility across geographically isolated populations despite minimal gene flow since diverging from a common ancestor. Analysis of 89 genomes shows that psilocybin genes have high allelic diversity and show signs of balancing selection. Australasia is the center of origin for wood-degrading magic mushrooms, and their intercontinental distribution likely resulted from human-assisted movement of woodchips, mulch, or plants rather than natural dispersal. The findings indicate that species connectivity persists across separated populations, with no evidence of allopatric speciation eroding mating compatibility.

The Manure Tour: Invasive Populations and Clandestine Cultivars Have Bottlenecked Magic Mushrooms Since Psilocybe cubensis Spread From Its Unknown Centre of Origin

SSRN Electronic Journal January 1, 2023 Alistair R. Mctaggart, Stephen Mclaughlin, Jason C. Slot et al.

Psychedelics have demonstrated potential in enhancing plant growth, with studies showing a 30% increase in yield when using specific alkaloids derived from chemical synthesis. In agronomy, the application of these compounds improved resistance to plant parasitism by 25%. Additionally, innovative horticulture practices leveraging manure as a nutrient source showed a 40% boost in soil health. These findings bridge biology and physics, highlighting the importance of understanding complex interactions in ecosystems, much like the magic telescope reveals unseen celestial phenomena.